MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
GH3.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 258
bases: 1,562,805 bps
CDS: 1,434
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 41
misc RNA:
Total features: 1,482
Total number of protein coding genes annotated/found:
1,434
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5009|JADGKK010000136.1
SEQF5009_00910
Genome Viewer
NA
AA
231/77
313-543
hypothetical protein
SEQF5009|JADGKK010000136.1
SEQF5009_00911
Genome Viewer
NA
AA
537/179
1434-898
hypothetical protein
SEQF5009|JADGKK010000136.1
SEQF5009_00912
Genome Viewer
NA
AA
2256/752
4092-1837
hypothetical protein
SEQF5009|JADGKK010000136.1
SEQF5009_00913
Genome Viewer
NA
AA
1623/541
5711-4089
hypothetical protein
SEQF5009|JADGKK010000136.1
SEQF5009_00914
Genome Viewer
NA
AA
1344/448
7524-6181
23S rRNA (uracil-C(5))-methyltransferase RlmCD
SEQF5009|JADGKK010000125.1
SEQF5009_00928
Genome Viewer
NA
AA
1506/502
832-2337
hypothetical protein
SEQF5009|JADGKK010000125.1
SEQF5009_00929
Genome Viewer
NA
AA
2331/777
4685-2355
Biosynthetic peptidoglycan transglycosylase
SEQF5009|JADGKK010000125.1
SEQF5009_00930
Genome Viewer
NA
AA
2205/735
6969-4765
Penicillin-binding protein 1A/1B
SEQF5009|JADGKK010000125.1
SEQF5009_00931
Genome Viewer
NA
AA
582/194
7550-6969
Holliday junction resolvase RecU
SEQF5009|JADGKK010000236.1
SEQF5009_00291
Genome Viewer
NA
AA
258/86
398-141
Aconitate hydratase A
SEQF5009|JADGKK010000102.1
SEQF5009_01442
Genome Viewer
NA
AA
882/294
1211-330
Manganese transport system membrane protein MntD
SEQF5009|JADGKK010000102.1
SEQF5009_01443
Genome Viewer
NA
AA
921/307
2133-1213
Manganese transport system membrane protein MntC
SEQF5009|JADGKK010000102.1
SEQF5009_01444
Genome Viewer
NA
AA
741/247
2866-2126
Manganese transport system ATP-binding protein MntB
SEQF5009|JADGKK010000102.1
SEQF5009_01445
Genome Viewer
NA
AA
2025/675
5162-3138
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01446
Genome Viewer
NA
AA
1026/342
6191-5166
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01447
Genome Viewer
NA
AA
951/317
7274-6324
Fructokinase
SEQF5009|JADGKK010000102.1
SEQF5009_01448
Genome Viewer
NA
AA
1299/433
8583-7285
Sucrose-6-phosphate hydrolase
SEQF5009|JADGKK010000102.1
SEQF5009_01449
Genome Viewer
NA
AA
1431/477
10003-8573
PTS system trehalose-specific EIIBC component
SEQF5009|JADGKK010000102.1
SEQF5009_01450
Genome Viewer
NA
AA
303/101
10182-10484
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01451
Genome Viewer
NA
AA
1251/417
11798-10548
Putative competence-damage inducible protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Page last updated: July 7, 2021 08:39:35
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